| numu1240 | Proto-Numugen | T,
M,
C,
P,
Numugenan | 59 |
| lowe1437 | Proto-Lower-Sepik | R,
Lower Sepik | 134 |
| | Proto-Sub-Rai | T,
M,
Rai Coast | 8 |
| nucl1709 | Proto-Trans-New-Guinea | Trans-New Guinea | 360 |
| east2767 | Proto-Eastern-Sogeram | N,
M,
K,
S,
Sogeram | 74 |
| sili1249 | Silimo | T,
W,
D,
Ngalik | 115 |
| goro1272 | Proto-Eastern-Central | N,
Kainantu-Goroka | 76 |
| doro1266 | Proto-Doromu | Manubaran | 179 |
| farw1236 | Proto-Far West | Lakes Plain | 117 |
| | Proto-Pihom | T,
M,
C,
Pihom | 42 |
| nucl1603 | Proto-Nuclear-Binandere | T,
G,
B,
Nuclear Binanderean | 124 |
| cent2120 | Proto-Chimbu-Wahgi | Nuclear Trans New Guinea | 1 |
| coas1297 | Proto-Coastal-Binandere | N,
G,
B,
N,
South Binanderean | 45 |
| kumi1249 | Proto-Kumil | N,
M,
C,
G,
N,
Kumil-Tibor | 23 |
| ziaa1250 | Proto-Zia-Mawae | T,
G,
B,
North Binanderean | 0 |
| awyu1263 | Proto-Awyu-Dumut | N,
A,
A,
Greater Awyu | 287 |
| kwal1257 | Proto-Kwalean | T,
S,
Kwalean | 161 |
| nort2909 | Proto-North-Binandere | T,
G,
B,
North Binanderean | 12 |
| | Proto-Isumrud | T,
M,
C,
Isumrud | 17 |
| raic1241 | Proto-Rai-Coast | T,
M,
Rai Coast | 258 |
| croi1234 | Proto-Croisilles | N,
Madang | 189 |
| fini1244 | Proto-Finisterre-Huon | Nuclear Trans New Guinea | 1 |
| east2494 | Proto-East-Eleman | Eleman | 14 |
| atan1241 | Proto-Western-Sogeram | T,
M,
S,
+,
Western | 62 |
| west2573 | Proto-West-Eleman | T,
Eleman | 13 |
| bara1376 | Proto-Baraic | Koiarian | 99 |
| east2502 | Proto-East-Tariku | L,
Tariku | 130 |
| west2582 | Proto-West-Tariku | L,
T,
West | 129 |
| musa1266 | Aisi | N,
M,
K,
S,
S,
E,
Aisian | 153 |
| | Proto-Eleman-Koriki | T,
Eleman | 20 |
| numu1240 | Proto-Tibor-Omosa | T,
M,
C,
Pihom | 117 |
| | Magɨ | T,
M,
S,
W,
Emuan | 85 |
| manu1261 | Proto-Manubaran | T,
S,
Manubaran | 171 |
| sile1255 | Sirva | T,
M,
S,
+,
C,
Northern | 63 |
| mabu1247 | Proto-Mabuso | T,
M,
Croisilles | 484 |
| cent2110 | Proto-Central-Tariku | L,
Tariku | 101 |
| bina1279 | Proto-Binandere | N,
Greater Binanderean | 325 |
| kain1274 | Proto-Eastern | N,
Kainantu-Goroka | 48 |
| nduu1242 | Proto-Ndu | S,
Ndu | 40 |
| dumu1247 | Proto-Dumut | N,
A,
A,
G,
Awyu-Dumut | 282 |
| goro1272 | Proto-Goroka | N,
Kainantu-Goroka | 1 |
| payn1244 | Manat | N,
M,
K,
S,
S,
A,
Greater West Sogeram | 46 |
| koia1260 | Proto-Koiarian | T,
S,
Koiarian | 124 |
| ocea1241 | Proto-Oceanic | A,
M,
C,
E,
O,
(Proto) | 311 |
| kowa1247 | Proto-Korak-Waskia | N,
M,
C,
Greater Northern Adelbert | 11 |
| | Proto-North-Adelbert | T,
M,
Croisilles | 486 |
| kain1274 | Proto-Kainantu | N,
Kainantu-Goroka | 1 |
| kain1273 | Proto-Kainantu-Goroka | Nuclear Trans New Guinea | 1 |
| grea1275 | Proto-Awyu | N,
A,
Awyu-Ok | 318 |
| mada1298 | Proto-Madang | T,
Madang | 251 |
